Hi Andrew,
The Bluetooth telephone module is located in the right rear section within the cargo / 3rd row seating area beneath the cup holder / trinket tray.
It is in behind the trim where the second row right hand side retracting seat belt roll is located. As you found it can not be accessed or seen from the jack and tools storage, it is closer to the right rear door fixed latch peg. The only telephone Bluetooth module wire accessible from jack storage compartment is the black ground wire which is one of two (in my vehicle) attached to the body grounding stud behind the right rear taillight - which you don’t need to do anything with this wire.
The module is accessible from the second row seating position with the right seat folded down and lifted for rear access. I don’t have the DVD changer in my LR so can’t be 100% sure if it makes things different. I partially removed the trim starting at the tailgate end opting to leave the second row seat belt lower anchor screwed in, just positioning the trim far enough out so I could reach in.
With this trim unclipped at the rear and under the side window I was able to swing the top far enough out so I could access the two torx screws holding the module in. The screws are at the top and there are locating tabs for the bottom.
For testing I was able to reach in from the right rear back door position with the trim only just removed to unplug the device and connect the MOST bypass.
Unfortunately I didn’t take any photos while I was working on it and will see if I can find a layout image and post it later.